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Sample GSM1010556 Query DataSets for GSM1010556
Status Public on Oct 18, 2012
Title Day41_B
Sample type RNA
 
Source name Day41
Organism Homo sapiens
Characteristics tissue: Peripheral blood
culture condition: CD138+ Plasma cells sorted on CD138 and 7-AAD, generated in the upper compartment of a transwell system after 28 days of IL-6, IFN-α and supplemented media, with M2-10B4 in the lower compartment.
gender: Female
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol and amplified using Illumina® TotalPrepTM-96 RNA Amplification Kit
Label Biotin
Label protocol Standard Illumina protocol
 
Hybridization protocol Standard Illumina protocol
Scan protocol Arrays were scanned on a BeadArray reader
Data processing Data were quantile normalised using Lumi for R [64-bit R version 2.15.1 (2012-06-22), lumi version 2.8.0].
 
Submission date Sep 27, 2012
Last update date Oct 18, 2012
Contact name Matthew Anthony Care
E-mail(s) [email protected]
Organization name The University of York
Department Department of Biology
Lab Bioscience Technology Facility, Data Science Hub
Street address Wentworth Way
City York
State/province North Yorkshire
ZIP/Postal code YO10 5DD
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE41208 In vitro generation of long-lived human Plasma Cells

Data table header descriptions
ID_REF
VALUE log2 Quantile-Normalised
Pval

Data table
ID_REF VALUE Pval
ILMN_1762337 7.579476314 0.07922
ILMN_2055271 7.599090838 0.06104
ILMN_1736007 7.445866553 0.30779
ILMN_2383229 7.417205903 0.39351
ILMN_1806310 7.547515649 0.1013
ILMN_1779670 7.372829828 0.53636
ILMN_1653355 7.41897335 0.38571
ILMN_1717783 7.181286472 0.97143
ILMN_1705025 7.396721974 0.45584
ILMN_1814316 7.51620078 0.14416
ILMN_2359168 7.355247026 0.59221
ILMN_1731507 7.400532463 0.44675
ILMN_1787689 7.187133621 0.96883
ILMN_3241953 7.706522438 0.02338
ILMN_1745607 7.279242268 0.83377
ILMN_2136495 7.322998442 0.70909
ILMN_1668111 7.318632869 0.72208
ILMN_2295559 7.45217326 0.29091
ILMN_1735045 7.377080122 0.52338
ILMN_1680754 7.33881243 0.65714

Total number of rows: 47323

Table truncated, full table size 1472 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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