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GEO accession:
Sample GSM1014225
Query DataSets for GSM1014225
Status
Public on Apr 22, 2013
Title
BT 474 21953
Sample type
RNA
Source name
Breast cancer cell line
Organism
Homo sapiens
Characteristics
cell line: BT 474
Growth protocol
Cell lines were grown according to standard conditions.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted with RNABee (Campro, Veenendaal, the Netherlands) according to the manufacturer procedure
Label
biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol
Scan protocol
Standard Affymetrix protocol
Data processing
The data were using Affymetrix software Expression Console with default analysis settings and RMA as normalization method.
Submission date
Oct 03, 2012
Last update date
Apr 22, 2013
Contact name
Marcel Smid
Organization name
Erasmus MC
Department
Medical Oncology
Street address
Dr. Molewaterplein 50
City
Rotterdam
ZIP/Postal code
PO Box 2040, 3000CA
Country
Netherlands
Platform ID
GPL13158
Series (1)
GSE41313
Expression data from breast cancer cell lines
Data table header descriptions
ID_REF
VALUE
log2 RMA signal
Data table
ID_REF
VALUE
1007_PM_s_at
9.749417
1053_PM_at
8.574081
117_PM_at
3.156342
121_PM_at
4.367578
1255_PM_g_at
2.686311
1294_PM_at
3.125265
1316_PM_at
3.813248
1320_PM_at
3.11434
1405_PM_i_at
2.653954
1431_PM_at
3.180927
1438_PM_at
7.091768
1487_PM_at
7.498145
1494_PM_f_at
3.369772
1552256_PM_a_at
6.674237
1552257_PM_a_at
8.914114
1552258_PM_at
2.973585
1552261_PM_at
3.086728
1552263_PM_at
5.228163
1552264_PM_a_at
6.348505
1552266_PM_at
2.883953
Total number of rows:
54715
Table truncated, full table size
1213 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1014225_21953.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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