|
Status |
Public on Oct 10, 2012 |
Title |
Rat Embryo antisense 2 (gene) |
Sample type |
RNA |
|
|
Source name |
Rat Embryo antisense 2 (gene)
|
Organism |
Rattus norvegicus |
Characteristics |
tissue: embryo transcript type: Antisense transcript (gene) ambion catalog number: AM7900
|
Extracted molecule |
total RNA |
Extraction protocol |
Tissue total RNA purchased from Ambion
|
Label |
biotin
|
Label protocol |
Sense transcript detection labeled using standard Affymetrix labeling protocol. Antisense transcript detection labeled using ATE protocol (Ge et al., 2008; PMID 18211689)
|
|
|
Hybridization protocol |
Array hybridization was performed according to the manufacturer's instruction (Affymetrix) at the UCLA Microarray Core Facility.
|
Scan protocol |
Array scanning was performed according to the manufacturer's instruction (Affymetrix) at the UCLA Microarray Core Facility.
|
Description |
RMA expression value derived from Expression Console software; core-exon analysis
|
Data processing |
probeset group file: RaEx-1_0-st-v1.r2.pgf meta-probeset file: RaEx-1_0-st-v1.r2.dt1.rn4.core.mps CEL files were processed using Affymetrix Expression Console
|
|
|
Submission date |
Oct 09, 2012 |
Last update date |
Apr 16, 2013 |
Contact name |
Maurice Ling |
E-mail(s) |
[email protected]
|
Organization name |
South Dakota State University
|
Department |
Mathematics and Statistics
|
Street address |
Box 2220
|
City |
Brookings |
ZIP/Postal code |
57007 |
Country |
USA |
|
|
Platform ID |
GPL6543 |
Series (2) |
GSE41409 |
Sense and antisense exon profiling across human, mouse, and rat |
GSE41462 |
Antisense exon profiling across human, mouse, and rat |
|
Relations |
Reanalysis of |
GSM1016966 |