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Sample GSM101745 Query DataSets for GSM101745
Status Public on Feb 13, 2007
Title Human control 2
Sample type RNA
 
Source name Human prefrontal cortex
Organism Homo sapiens
Characteristics State: Normal
Tissue: Prefrontal cortex
Treatment: Untreated
Biomaterial provider Shared Ltd.
Treatment protocol Human post-mortem samples.
Growth protocol Human post-mortem samples.
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA from the prefrontal cortex sample was performed according to the manufacturer's instructions.
Label Biotin
Label protocol According to the standard protocol outlined in the Affymetrix GeneChip Expression Analysis Technical Manual
 
Hybridization protocol According to the manufacturer's instructions.
Scan protocol At 3-Am resolution using the GeneChip System confocal scanner (Hewlett-Packard, Santa Clara, CA) with a 488-nm emission and detection at 70 nm, controlled by Affymetrix Microarray Suite 5.0 (Affymetrix).
Description Prefrontal cortex of human control 2.
Data processing Raw
 
Submission date Mar 27, 2006
Last update date Nov 22, 2006
Contact name Markus Storvik
Organization name University of Eastern Finland
Department Pharmacology
Street address University of Eastern Finland
City Kuopio
ZIP/Postal code 70211
Country Finland
 
Platform ID GPL96
Series (1)
GSE4550 Genes regulated in MPTP-treated macaques

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL The call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 129.7 P
AFFX-BioB-M_at 135.1 P
AFFX-BioB-3_at 121.6 P
AFFX-BioC-5_at 406.1 P
AFFX-BioC-3_at 285.8 P
AFFX-BioDn-5_at 341.5 P
AFFX-BioDn-3_at 2191.2 P
AFFX-CreX-5_at 3837.3 P
AFFX-CreX-3_at 5016.9 P
AFFX-DapX-5_at 16.5 A
AFFX-DapX-M_at 22.1 A
AFFX-DapX-3_at 3.0 A
AFFX-LysX-5_at 13.8 A
AFFX-LysX-M_at 22.6 A
AFFX-LysX-3_at 5.2 A
AFFX-PheX-5_at 3.9 A
AFFX-PheX-M_at 3.6 A
AFFX-PheX-3_at 31.5 A
AFFX-ThrX-5_at 3.7 A
AFFX-ThrX-M_at 20.6 A

Total number of rows: 22283

Table truncated, full table size 399 Kbytes.




Supplementary data files not provided

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