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| Status |
Public on Dec 19, 2006 |
| Title |
PAOSC11 from epithelia, replicate 1 |
| Sample type |
RNA |
| |
|
| Source name |
PAOSC11 from epithelia
|
| Organism |
Pseudomonas aeruginosa |
| Characteristics |
PAO1 with mutations in exsA and rhlA
|
| Extracted molecule |
total RNA |
| Label |
biotin
|
| |
|
| Description |
PAOSC11 washed from epithelial cells following a 5 h coincubation
|
| Data processing |
standard Affymetrix procedures
|
| |
|
| Submission date |
Apr 05, 2006 |
| Last update date |
Dec 19, 2006 |
| Contact name |
S Chugani |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Washington
|
| Street address |
1959 NE Pacific St, HSB I-420, Box 357242
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98195 |
| Country |
USA |
| |
|
| Platform ID |
GPL84 |
| Series (1) |
| GSE4614 |
The Influence of Human Respiratory Epithelia on Pseudomonas aeruginosa Gene Expression |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
MAS5-calculated signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-YEL002C_WPB1_at |
0.7 |
A |
0.660442 |
| AFFX-YEL018W_at |
1 |
A |
0.660442 |
| AFFX-YEL024W_RIP1_at |
12.2 |
A |
0.339558 |
| AFFX-YFL039C_ACT1_at |
40.7 |
A |
0.397994 |
| AFFX-YER148W_SPT15_at |
31.2 |
A |
0.88284 |
| AFFX-YER022W_SRB4_at |
1.2 |
A |
0.35869 |
| AFFX-Athal_GAPDH_at |
4.3 |
A |
0.975289 |
| AFFX-Athal_ubq_at |
10.4 |
A |
0.892699 |
| AFFX-Athal_actin_at |
3.5 |
A |
0.697453 |
| AFFX-Bsubtilis_dapB_at |
5 |
A |
0.918663 |
| AFFX-Bsubtilis_lys_at |
10.1 |
A |
0.824011 |
| AFFX-Bsubtilis_pheB_at |
10.4 |
A |
0.837065 |
| AFFX-Bsubtilis_thrC_at |
11.2 |
A |
0.749276 |
| AFFX-Bsubtilis_trpD_at |
4.2 |
A |
0.986908 |
| Pae_flgK_at |
261.8 |
A |
0.139354 |
| Pae_flgL_at |
40.7 |
A |
0.933521 |
| Pae_orfA_vioA_at |
98.2 |
A |
0.789211 |
| Pae_orfB_at |
337.2 |
M |
0.050263 |
| Pae_orfC_at |
138.4 |
A |
0.569348 |
| Pae_orfD_at |
203 |
A |
0.675178 |
Total number of rows: 5900
Table truncated, full table size 168 Kbytes.
| Supplementary data files not provided |
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