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Sample GSM103555 Query DataSets for GSM103555
Status Public on Apr 11, 2006
Title Treatment: 018; time: 6 hrs; repeat: 2; chip B
Sample type RNA
 
Source name LNCaP cells; Human, prostate carcinoma, metastasized to lymph node; Maintained in DMEM/8% charcoal-stripped serum for 3 days before treatment.
Organism Homo sapiens
Characteristics In this experiment LNCaP cells
were treated with Vehicle (ethanol),
DHT (10 nM) or RTI-6413-018 (100 nM).
Treatment was done for 6 and 24 hrs.
The entire experiment was repeated 3 times.
Extracted molecule total RNA
Label Biotin
 
Description A study of the SARM-regulated gene expression in LNCaP prostate carcinoma cells
Data processing Standard Affymetrix scanning/normalization process
 
Submission date Apr 06, 2006
Last update date Apr 10, 2006
Contact name Dmitri A Kazmin
E-mail(s) [email protected]
Organization name Stanford University
Department Institute for Immunity, Transplantation and Infection
Lab Bali Pulendran
Street address 240 Pasteur Dr
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Platform ID GPL97
Series (1)
GSE4636 Differential redulation of gene expression by an RTI SARM and canonical agonist of androgen receptor

Data table header descriptions
ID_REF
0068_1712_H133B_186.2_Stat Pairs Probe pairs available (PM/MM)
0068_1712_H133B_186.2_Stat Pairs Used Probe pairs used (PM/MM)
VALUE Absolute measured signal
ABS_CALL Present/absent call
DETECTION P-VALUE P-value for the P/A call

Data table
ID_REF 0068_1712_H133B_186.2_Stat Pairs 0068_1712_H133B_186.2_Stat Pairs Used VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 20 20 857.9 P 0.00141
AFFX-BioB-M_at 20 20 2026.5 P 0.000081
AFFX-BioB-3_at 20 20 1234 P 0.00011
AFFX-BioC-5_at 20 20 2010.8 P 0.000052
AFFX-BioC-3_at 20 20 2012.4 P 0.00007
AFFX-BioDn-5_at 20 20 2459.5 P 0.00007
AFFX-BioDn-3_at 20 20 13609.8 P 0.00007
AFFX-CreX-5_at 20 20 23335.3 P 0.000044
AFFX-CreX-3_at 20 20 33704.7 P 0.000044
AFFX-DapX-5_at 20 20 27.1 A 0.470241
AFFX-DapX-M_at 20 20 16.2 A 0.617401
AFFX-DapX-3_at 20 20 10.3 A 0.98333
AFFX-LysX-5_at 20 20 61.9 A 0.262827
AFFX-LysX-M_at 20 20 74.1 A 0.52976
AFFX-LysX-3_at 20 20 30 A 0.275146
AFFX-PheX-5_at 20 20 9.2 A 0.921998
AFFX-PheX-M_at 20 20 4 A 0.971543
AFFX-PheX-3_at 20 20 73.5 A 0.455413
AFFX-ThrX-5_at 20 20 15.4 A 0.794268
AFFX-ThrX-M_at 20 20 36.5 A 0.544588

Total number of rows: 22645

Table truncated, full table size 725 Kbytes.




Supplementary file Size Download File type/resource
GSM103555.CEL.gz 3.3 Mb (ftp)(http) CEL

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