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Sample GSM1038144 Query DataSets for GSM1038144
Status Public on Nov 17, 2012
Title HKLM-aster
Sample type RNA
 
Source name monocytes_HKLM
Organism Homo sapiens
Characteristics cell type: monocytes
treated with: HKLM (10^8 cells/ml InvivoGen)
replicates: aster
Extracted molecule total RNA
Extraction protocol Cells lysed in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA)
Label biotin
Label protocol GeneChip 2-cycle target labeling kit cDNA Synthesis Kit (Affymetrix )
 
Hybridization protocol GeneChip cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Description 4_HKLM-x
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Nov 16, 2012
Last update date Nov 17, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE42305 TREM-1 is a novel therapeutic target in Psoriasis

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 2.741834934
1053_at 7.076613715
117_at 9.71724622
121_at 6.857384336
1255_g_at 2.158659319
1294_at 2.54633734
1316_at 2.180465177
1320_at 2.158659319
1405_i_at 11.25463456
1431_at 2.158659319
1438_at 2.158659319
1487_at 7.900119779
1494_f_at 2.158659319
1598_g_at 2.178656461
160020_at 11.29158034
1729_at 8.351792385
177_at 5.880503918
1773_at 2.158659319
179_at 2.158659319
1861_at 5.129376513

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.




Supplementary file Size Download File type/resource
GSM1038144_4_HKLM-x.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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