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Sample GSM106223 Query DataSets for GSM106223
Status Public on Sep 27, 2006
Title ALLREZ.P57
Sample type RNA
 
Source name bone marrow (freshly isolated mononuclear cells)
Organism Homo sapiens
Characteristics Age at relapse diagnosis [years]: 6.2
Sex: male
Immunophenotype: common
Time of relapse: early
Site of relapse: isolated BM
ALL-REZ BFM risk group: high (S3)
Peripheral blast count at relapse diagnosis per microliter: NA
Minimal residual disease (after 2 induction cycles): NA
Genetic features: not found
S and G2/M phase cells [%]: NA
Frontline therapy: COALL 06-97
Extracted molecule total RNA
Label Biotin
 
Description first relapse acute lymphocytic leukemia
Data processing Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
 
Submission date Apr 21, 2006
Last update date Nov 14, 2018
Contact name Renate Kirschner-Schwabe
E-mail(s) [email protected]
Phone +4930450566088
Fax +4930450566946
URL http://www.charite.de/paedonko
Organization name Charité - Universitätsmedizin Berlin
Department Pediatric Oncology/Hematology
Lab Molecular Genetics
Street address Augustenburger Platz 1
City Berlin
ZIP/Postal code 12167
Country Germany
 
Platform ID GPL96
Series (1)
GSE4698 Molecular characterization of very early relapsed childhood ALL
Relations
Reanalyzed by GSE122505

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsinh (log-like) scale

Data table
ID_REF VALUE
1007_s_at 3.14768288540083
1053_at 2.23249056982915
117_at 1.92717975365015
121_at 3.54666319549412
1255_g_at 0.784519944805719
1294_at 3.24386984018030
1316_at 1.87149314002739
1320_at 1.32747080974706
1405_i_at 2.05618110877475
1431_at 0.887904863244382
1438_at 2.39919363212902
1487_at 2.49550985951843
1494_f_at 2.32195640279287
1598_g_at 3.45905937521950
160020_at 2.94500607128004
1729_at 2.42145938202159
1773_at 1.87686278302736
177_at 1.63742676697341
179_at 3.55891661511935
1861_at 1.77058216922856

Total number of rows: 22283

Table truncated, full table size 608 Kbytes.




Supplementary file Size Download File type/resource
GSM106223.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM106223.EXP.gz 491 b (ftp)(http) EXP

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