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Sample GSM1068282 Query DataSets for GSM1068282
Status Public on May 01, 2013
Title ob_16 weeks_non-fasted_rep_1 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: non-fasted
strain: B6.V-Lep ob/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 01W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 3345.697917 0
ILMN_2721178 772 0
ILMN_3033922 1619.347917 0
ILMN_3092673 6076.4375 0
ILMN_2816356 102.8833333 0.02381
ILMN_2808939 1288.997917 0
ILMN_2634564 421.4166667 0
ILMN_2737647 73.56458333 0.50877
ILMN_2734484 459.7520833 0
ILMN_2952292 133.865625 0.00251
ILMN_2699078 69.56875 0.68296
ILMN_1213681 266.8239583 0
ILMN_2735413 737.259375 0
ILMN_2735415 864.6166667 0
ILMN_2891688 685.2583333 0
ILMN_2637698 629.1958333 0
ILMN_2674228 244.9239583 0
ILMN_2601546 101.61875 0.02632
ILMN_1230831 74.11666667 0.48246
ILMN_2848071 857.8958333 0

Total number of rows: 25697

Table truncated, full table size 756 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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