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Sample GSM1068308 Query DataSets for GSM1068308
Status Public on May 01, 2013
Title ob_48 weeks_non-fasted_rep_3 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: non-fasted
strain: B6.V-Lep ob/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 27W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2581.710417 0
ILMN_2721178 574.4333333 0
ILMN_3033922 1372.029167 0
ILMN_3092673 6278.508333 0
ILMN_2816356 120.0083333 0.00251
ILMN_2808939 2310.745833 0
ILMN_2634564 451.78125 0
ILMN_2737647 71.65416667 0.60025
ILMN_2734484 284.1958333 0
ILMN_2952292 133.6416667 0.00125
ILMN_2699078 63.2 0.91604
ILMN_1213681 307.8614583 0
ILMN_2735413 620.5802083 0
ILMN_2735415 840.1583333 0
ILMN_2891688 609.490625 0
ILMN_2637698 830.225 0
ILMN_2674228 218.6385417 0
ILMN_2601546 91.13125 0.08521
ILMN_1230831 74.21875 0.49373
ILMN_2848071 623.86875 0

Total number of rows: 25697

Table truncated, full table size 753 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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