NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1068346 Query DataSets for GSM1068346
Status Public on May 01, 2013
Title ob_16 weeks_non-fasted_rep_1 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: non-fasted
strain: B6.V-Lep ob/J
diet: D12450B
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 01M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4368.333333 0
ILMN_2721178 877.1729167 0
ILMN_3033922 1057.914583 0
ILMN_3092673 4174.277083 0
ILMN_2816356 87.52291667 0.00627
ILMN_2808939 188.884375 0
ILMN_2634564 393.7458333 0
ILMN_2737647 57.59166667 0.48872
ILMN_2734484 723.4427083 0
ILMN_2952292 117.421875 0
ILMN_2699078 56.38125 0.56516
ILMN_1213681 397.2260417 0
ILMN_2735413 171.0697917 0
ILMN_2735415 227.0354167 0
ILMN_2891688 835.9541667 0
ILMN_2637698 616.9395833 0
ILMN_2674228 201.1520833 0
ILMN_2601546 65.99791667 0.13659
ILMN_1230831 64.11666667 0.18421
ILMN_2848071 131.9229167 0

Total number of rows: 25697

Table truncated, full table size 744 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap