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Sample GSM1068369 Query DataSets for GSM1068369
Status Public on May 01, 2013
Title dt_16 weeks_fasted_rep_3 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: fasted
strain: C57BL/6J
diet: D12492
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 24M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4779.141667 0
ILMN_2721178 1187.904167 0
ILMN_3033922 1150.014583 0
ILMN_3092673 3829.064583 0
ILMN_2816356 106.9375 0
ILMN_2808939 153.8854167 0
ILMN_2634564 482.0083333 0
ILMN_2737647 71.65208333 0.09273
ILMN_2734484 966.7770833 0
ILMN_2952292 101.09375 0.00376
ILMN_2699078 54.24791667 0.69925
ILMN_1213681 520.35 0
ILMN_2735413 67.37083333 0.16667
ILMN_2735415 79.55208333 0.03509
ILMN_2891688 614.7125 0
ILMN_2637698 643.6916667 0
ILMN_2674228 235.2916667 0
ILMN_2601546 65.76041667 0.20677
ILMN_1230831 81.56458333 0.02882
ILMN_2848071 73.01458333 0.08145

Total number of rows: 25697

Table truncated, full table size 746 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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