GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM106974
Query DataSets for GSM106974
Status
Public on May 02, 2006
Title
CTIP 20 #1
Sample type
RNA
Source name
MCF10A cells in 3-D culture
Organism
Homo sapiens
Characteristics
Human mammary epithelial MCF10A cells
Extracted molecule
total RNA
Label
Biotin labeled
Description
Human mammary epithelial MCF10A cells grown in 3-D Matrigel for 15 h after depletion of CTIP by viral RNAi
Data processing
GCOS 1.4.0
Submission date
Apr 27, 2006
Last update date
May 01, 2006
Contact name
Wen-Hwa Lee
E-mail(s)
[email protected]
Phone
949-824-8558
Fax
949-824-2688
Organization name
University of California, Irvine
Department
Biological Chemistry
Lab
Wen-Hwa Lee's lab
Street address
140 Sprague Hall
City
Irvine
State/province
CA
ZIP/Postal code
92697
Country
USA
Platform ID
GPL570
Series (2)
GSE4751
MCF10A cells in 3-D culture for 15 h after treatment with CtIP-RNAi vs Luc-RNAi adenovirus
GSE4754
MCF10A cells in 3-D culture after treatment with BRCA1-RNAi or CtIP-RNAi
Data table header descriptions
ID_REF
VALUE
Normalized Data based on a target intensity of 500
Data table
ID_REF
VALUE
AFFX-BioB-5_at
615.7
AFFX-BioB-M_at
777.3
AFFX-BioB-3_at
567.9
AFFX-BioC-5_at
2035.6
AFFX-BioC-3_at
2462.5
AFFX-BioDn-5_at
4187.2
AFFX-BioDn-3_at
9280.3
AFFX-CreX-5_at
23070
AFFX-CreX-3_at
30542
AFFX-DapX-5_at
5662.4
AFFX-DapX-M_at
10427.2
AFFX-DapX-3_at
15674.6
AFFX-LysX-5_at
796.2
AFFX-LysX-M_at
1079
AFFX-LysX-3_at
2752.2
AFFX-PheX-5_at
1510.2
AFFX-PheX-M_at
1942.9
AFFX-PheX-3_at
1559.4
AFFX-ThrX-5_at
1397.9
AFFX-ThrX-M_at
2814.7
Total number of rows:
54675
Table truncated, full table size
859 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
