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Sample GSM1104099 Query DataSets for GSM1104099
Status Public on Nov 15, 2013
Title Muscle_Subject05_Exercise_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to execise group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 5
protocol: exercise (baseline)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the exercise group
Subject05_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) [email protected]
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.049849803
1053_at 6.290874446
117_at 5.080820254
121_at 7.778603363
1255_g_at 2.783475489
1294_at 6.490349763
1316_at 5.794624887
1320_at 4.384249279
1405_i_at 3.717025989
1431_at 3.878033145
1438_at 5.20815981
1487_at 9.945057434
1494_f_at 5.753232316
1552256_a_at 6.859949717
1552257_a_at 6.246313709
1552258_at 3.395630303
1552261_at 4.311065836
1552263_at 2.989078262
1552264_a_at 7.496642123
1552266_at 3.123510314

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1104099_S18.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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