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Sample GSM1104111 Query DataSets for GSM1104111
Status Public on Nov 15, 2013
Title Muscle_Subject09_Exercise_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to execise group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 9
protocol: exercise (baseline)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the exercise group
Subject09_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) [email protected]
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.818695887
1053_at 5.9050293
117_at 4.944945929
121_at 7.572111604
1255_g_at 2.939020955
1294_at 6.201799832
1316_at 6.916444959
1320_at 4.281636502
1405_i_at 3.534659758
1431_at 3.711590632
1438_at 5.217563431
1487_at 9.831015801
1494_f_at 5.842637325
1552256_a_at 7.083082326
1552257_a_at 6.747046384
1552258_at 3.535988425
1552261_at 4.335865383
1552263_at 3.490569825
1552264_a_at 6.437137278
1552266_at 3.142064046

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104111_S30.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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