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Sample GSM1104119 Query DataSets for GSM1104119
Status Public on Nov 15, 2013
Title Muscle_Subject13_Control_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to control group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 13
protocol: control (non-exercised)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the control (non-exercised) group
Subject13_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) [email protected]
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.111504292
1053_at 5.905304063
117_at 5.066156228
121_at 7.808813363
1255_g_at 2.933671372
1294_at 6.771519756
1316_at 6.577680881
1320_at 4.44564702
1405_i_at 3.553723936
1431_at 4.053072425
1438_at 5.54442403
1487_at 10.03520601
1494_f_at 5.878077494
1552256_a_at 6.912388312
1552257_a_at 6.61606177
1552258_at 3.54704491
1552261_at 4.328157265
1552263_at 2.868794667
1552264_a_at 6.365494481
1552266_at 2.987694752

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104119_S38.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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