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Sample GSM1104124 Query DataSets for GSM1104124
Status Public on Nov 15, 2013
Title Muscle_Subject15_Exercise_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to execise group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 15
protocol: exercise (baseline)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the exercise group
Subject15_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) [email protected]
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.449361589
1053_at 6.048569409
117_at 4.893179389
121_at 7.910111057
1255_g_at 2.839645396
1294_at 6.507661797
1316_at 6.519869251
1320_at 4.844424181
1405_i_at 3.380889836
1431_at 3.781973828
1438_at 5.514278902
1487_at 9.480600709
1494_f_at 5.866113756
1552256_a_at 6.979861703
1552257_a_at 6.403774003
1552258_at 3.497909598
1552261_at 4.601626889
1552263_at 3.318478264
1552264_a_at 7.452150278
1552266_at 3.073810033

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104124_S43.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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