NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1124860 Query DataSets for GSM1124860
Status Public on Oct 20, 2013
Title Insm1 control #4
Sample type RNA
 
Source name Insm1 control #4_pituitary gland
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype/variation: Insm1 +/-
developmental stage: embryo
age: E17.5
tissue: pituitary gland
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 5003391025_h
replicate 4
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Apr 17, 2013
Last update date Oct 20, 2013
Contact name Jochen Welcker
E-mail(s) [email protected]
Organization name MDC Berlin
Street address Robert-Rössle-Str. 10
City Berlin
ZIP/Postal code 13125
Country Germany
 
Platform ID GPL6885
Series (1)
GSE46139 Genome-wide analysis of E17.5 pituitary gland gene expression of control and Insm1 mutant mice

Data table header descriptions
ID_REF
VALUE quantile normalized signal [AVG_Signal]
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 2569.766 0
ILMN_2707227 12.9007 0.1115288
ILMN_2896528 6711.526 0
ILMN_2721178 1043.3 0
ILMN_1227723 333.8085 0
ILMN_3033922 1618.194 0
ILMN_3092673 10273.49 0
ILMN_2730714 4473.397 0
ILMN_3162224 2389.775 0
ILMN_2816356 77.17329 0
ILMN_2808939 909.6946 0
ILMN_2634564 608.4464 0
ILMN_1216623 800.4543 0
ILMN_1215157 1116.737 0
ILMN_1228777 -4.248635 0.6253133
ILMN_2737647 10.43073 0.1466165
ILMN_1216425 -4.98756 0.6666667
ILMN_2734484 1511.92 0
ILMN_2652961 -7.155365 0.7769424
ILMN_2952292 101.1365 0

Total number of rows: 25697

Table truncated, full table size 712 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap