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Sample GSM1124866 Query DataSets for GSM1124866
Status Public on Oct 20, 2013
Title Insm1 control #10
Sample type RNA
 
Source name Insm1 control #10_pituitary gland
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype/variation: Insm1 +/-
developmental stage: embryo
age: E17.5
tissue: pituitary gland
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 5003391030_c
replicate 10
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Apr 17, 2013
Last update date Oct 20, 2013
Contact name Jochen Welcker
E-mail(s) [email protected]
Organization name MDC Berlin
Street address Robert-Rössle-Str. 10
City Berlin
ZIP/Postal code 13125
Country Germany
 
Platform ID GPL6885
Series (1)
GSE46139 Genome-wide analysis of E17.5 pituitary gland gene expression of control and Insm1 mutant mice

Data table header descriptions
ID_REF
VALUE quantile normalized signal [AVG_Signal]
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 1819.168 0
ILMN_2707227 4.039582 0.2669173
ILMN_2896528 7198.373 0
ILMN_2721178 991.5235 0
ILMN_1227723 364.9697 0
ILMN_3033922 1295.006 0
ILMN_3092673 9156.303 0
ILMN_2730714 4006.307 0
ILMN_3162224 2127.202 0
ILMN_2816356 39.28135 0
ILMN_2808939 1068.253 0
ILMN_2634564 539.8192 0
ILMN_1216623 938.938 0
ILMN_1215157 1377.974 0
ILMN_1228777 13.75756 0.0726817
ILMN_2737647 -0.0975228 0.4160401
ILMN_1216425 -10.57612 0.9022557
ILMN_2734484 1611.639 0
ILMN_2652961 -10.73656 0.9085213
ILMN_2952292 80.74866 0

Total number of rows: 25697

Table truncated, full table size 708 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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