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Sample GSM1177242 Query DataSets for GSM1177242
Status Public on Jun 29, 2013
Title subject A before exercise
Sample type RNA
 
Channel 1
Source name serum_before exercise
Organism Homo sapiens
Characteristics subject: healthy male
timepoint: before an acute resistance exercise
tissue: serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy3
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
Channel 2
Source name Total RNA from the pooled serum
Organism Homo sapiens
Characteristics tissue: Pooled human serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy5
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
 
Hybridization protocol Labeled RNA was hybridized to the microarray slide for 16-20 hr at 56 degrees C and washed with miRCURY LNA microRNA Power Labeling kit (Exiqon) according to manufacture's protocol.
Scan protocol Hybridization signals were detected by DNA microarray scanner G2505B (Agilent Technologies) with resolution of 10 micrometres . The scanned images were analyzed using Agilent Feature Extraction ver. 9.1.3.1.
Description A-pre
Data processing At first Hy3 (samples) signal was normalized with division used Hy5 (Universal reference) signal. Then each signal value of unique probe ID was calculated from average of Hy3/Hy5 normalized signal intensities of replicated probes.
 
Submission date Jun 28, 2013
Last update date Jun 29, 2013
Contact name Takayuki Akimoto
E-mail(s) [email protected]
Organization name The University of Tokyo
Street address Hongo 7-3-1
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platform ID GPL17382
Series (1)
GSE48405 Human plasma: circulating microRNA after acute resistance exercise

Data table header descriptions
ID_REF
VALUE Averaged signal intensity (Hy3/Hy5)

Data table
ID_REF VALUE
-1 0.836500851
1100 0.149332408
4040 1.187734245
4390 1.129411689
4610 1.214647777
4700 0.454931392
5250 1.319703573
5730 0.856595651
5740 1.227558768
6880 1.393467629
9938 1.284721794
10138 0.959056558
10306 1.086734653
10899 0.701530528
10901 1.249061361
10902 1.061959111
10903 1.013651617
10904 0.96264456
10905 0.825862454
10906 1.064994592

Total number of rows: 2673

Table truncated, full table size 48 Kbytes.




Supplementary file Size Download File type/resource
GSM1177242_CB-RNA24-1.txt.gz 984.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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