NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1177245 Query DataSets for GSM1177245
Status Public on Jun 29, 2013
Title subject A 3 days after exercise
Sample type RNA
 
Channel 1
Source name serum_3d after exercise
Organism Homo sapiens
Characteristics subject: healthy male
timepoint: 1day after an acute resistance exercise
tissue: serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy3
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
Channel 2
Source name Total RNA from the pooled serum
Organism Homo sapiens
Characteristics tissue: Pooled human serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy5
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
 
Hybridization protocol Labeled RNA was hybridized to the microarray slide for 16-20 hr at 56 degrees C and washed with miRCURY LNA microRNA Power Labeling kit (Exiqon) according to manufacture's protocol.
Scan protocol Hybridization signals were detected by DNA microarray scanner G2505B (Agilent Technologies) with resolution of 10 micrometres . The scanned images were analyzed using Agilent Feature Extraction ver. 9.1.3.1.
Description A-post3day
Data processing At first Hy3 (samples) signal was normalized with division used Hy5 (Universal reference) signal. Then each signal value of unique probe ID was calculated from average of Hy3/Hy5 normalized signal intensities of replicated probes.
 
Submission date Jun 28, 2013
Last update date Jun 29, 2013
Contact name Takayuki Akimoto
E-mail(s) [email protected]
Organization name The University of Tokyo
Street address Hongo 7-3-1
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platform ID GPL17382
Series (1)
GSE48405 Human plasma: circulating microRNA after acute resistance exercise

Data table header descriptions
ID_REF
VALUE Averaged signal intensity (Hy3/Hy5)

Data table
ID_REF VALUE
-1 0.742013265
1100 0.129991002
4040 1.401432508
4390 1.364923261
4610 1.103680663
4700 0.550958015
5250 1.080146223
5730 0.593311253
5740 1.181401337
6880 1.245832395
9938 1.238696799
10138 0.961213805
10306 0.976775749
10899 0.79739566
10901 1.004012786
10902 0.813138623
10903 0.641820164
10904 0.72759246
10905 0.712685127
10906 0.891847782

Total number of rows: 2673

Table truncated, full table size 48 Kbytes.




Supplementary file Size Download File type/resource
GSM1177245_CB-RNA24-4.txt.gz 942.8 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap