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Sample GSM1177253 Query DataSets for GSM1177253
Status Public on Jun 29, 2013
Title subject C 3 days after exercise
Sample type RNA
 
Channel 1
Source name serum_3d after exercise
Organism Homo sapiens
Characteristics subject: healthy male
timepoint: 1day after an acute resistance exercise
tissue: serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy3
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
Channel 2
Source name Total RNA from the pooled serum
Organism Homo sapiens
Characteristics tissue: Pooled human serum
Extracted molecule total RNA
Extraction protocol Total RNA extracted using QIAzol following manufacturer's instructions
Label Hy5
Label protocol miRCURY LNA microRNA Hi Power Labeling kit
 
 
Hybridization protocol Labeled RNA was hybridized to the microarray slide for 16-20 hr at 56 degrees C and washed with miRCURY LNA microRNA Power Labeling kit (Exiqon) according to manufacture's protocol.
Scan protocol Hybridization signals were detected by DNA microarray scanner G2505B (Agilent Technologies) with resolution of 10 micrometres . The scanned images were analyzed using Agilent Feature Extraction ver. 9.1.3.1.
Description C-post3day
Data processing At first Hy3 (samples) signal was normalized with division used Hy5 (Universal reference) signal. Then each signal value of unique probe ID was calculated from average of Hy3/Hy5 normalized signal intensities of replicated probes.
 
Submission date Jun 28, 2013
Last update date Jun 29, 2013
Contact name Takayuki Akimoto
E-mail(s) [email protected]
Organization name The University of Tokyo
Street address Hongo 7-3-1
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platform ID GPL17382
Series (1)
GSE48405 Human plasma: circulating microRNA after acute resistance exercise

Data table header descriptions
ID_REF
VALUE Averaged signal intensity (Hy3/Hy5)

Data table
ID_REF VALUE
-1 0.826921111
1100 0.388731607
4040 1.331255808
4390 1.166041273
4610 0.879218863
4700 0.491333667
5250 1.00880801
5730 0.606006345
5740 1.308508154
6880 1.352978373
9938 1.373589741
10138 0.8846358
10306 0.994608819
10899 0.846230178
10901 0.844114217
10902 0.753416139
10903 0.634292207
10904 0.817025365
10905 0.713604408
10906 0.877373019

Total number of rows: 2673

Table truncated, full table size 48 Kbytes.




Supplementary file Size Download File type/resource
GSM1177253_CB-RNA24-12.txt.gz 941.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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