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GEO accession:
Sample GSM11827
Query DataSets for GSM11827
Status
Public on Nov 25, 2003
Title
N023 Normal Human Kidney U133B
Sample type
RNA
Source name
Trizol isolation of total RNA from normal tissue adjacent to Renal Cell Carcinoma
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 72; Gender = Female; Right Kidney; Tumor Type = clear cell; Adjacent Tumor Fuhrman Grade = 1; Adjacent Tumor Capsule Penetration = true; Adjacent Tumor Perinephric Fat Invasion = false; Adjacent Tumor Renal Sinus Invasion = false; Adjacent Tumor Renal Vein Invasion = false; Tumor Location: mid; Scaling Target = 500; Scaling Factor = 7.30; Raw Q = 2.49; Noise = 2.89; Background = 56.96.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
Submission date
Oct 20, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
[email protected]
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL97
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
2990.4
P
AFFX-BioB-M_at
5565.2
P
AFFX-BioB-3_at
3942.4
P
AFFX-BioC-5_at
6510.6
P
AFFX-BioC-3_at
5912.1
P
AFFX-BioDn-5_at
7824
P
AFFX-BioDn-3_at
36542
P
AFFX-CreX-5_at
70398.8
P
AFFX-CreX-3_at
98998.1
P
AFFX-DapX-5_at
12.3
A
AFFX-DapX-M_at
82.7
A
AFFX-DapX-3_at
15.6
A
AFFX-LysX-5_at
72.7
A
AFFX-LysX-M_at
207
A
AFFX-LysX-3_at
18.6
A
AFFX-PheX-5_at
12.1
A
AFFX-PheX-M_at
137.4
A
AFFX-PheX-3_at
82.3
A
AFFX-ThrX-5_at
52.6
A
AFFX-ThrX-M_at
94.6
A
Total number of rows:
22645
Table truncated, full table size
399 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM11827.CEL.gz
3.1 Mb
(ftp)
(http)
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