GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM118788
Query DataSets for GSM118788
Status
Public on Sep 27, 2006
Title
EC2003122309AA
Sample type
RNA
Source name
cmap_well:109
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: sulindac
concentration: .00005 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with sulindac (.00005 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
[email protected]
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL96
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
493.7
P
1053_at
106.5
P
117_at
38
M
121_at
304.6
P
1255_g_at
21.8
A
1294_at
83.2
A
1316_at
27.6
P
1320_at
26.1
A
1405_i_at
2.2
A
1431_at
15.6
A
1438_at
54.7
A
1487_at
153.1
P
1494_f_at
99.7
P
1598_g_at
254.6
P
160020_at
95.7
P
1729_at
77.5
P
1773_at
64.4
A
177_at
8.6
A
179_at
261.7
P
1861_at
82.4
P
Total number of rows:
22283
Table truncated, full table size
387 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM118788.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
