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GEO accession:
Sample GSM118808
Query DataSets for GSM118808
Status
Public on Sep 27, 2006
Title
EC2004012209AA
Sample type
RNA
Source name
cmap_well:153
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: trichostatin A
concentration: .0000001 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with trichostatin A (.0000001 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
[email protected]
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL96
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
443.4
P
1053_at
113
P
117_at
33.6
A
121_at
321.1
P
1255_g_at
13.5
A
1294_at
63.2
A
1316_at
37
P
1320_at
20
A
1405_i_at
1.9
A
1431_at
23.6
A
1438_at
119.4
P
1487_at
135.5
P
1494_f_at
96.4
P
1598_g_at
161.1
P
160020_at
195.2
P
1729_at
76.5
P
1773_at
33.4
A
177_at
9.2
A
179_at
279.7
P
1861_at
71
P
Total number of rows:
22283
Table truncated, full table size
388 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM118808.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
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