GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM119169
Query DataSets for GSM119169
Status
Public on Sep 27, 2006
Title
5202764005791175120104.A05
Sample type
RNA
Source name
cmap_well:1007
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: depudecin
concentration: .000001 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with depudecin (.000001 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
[email protected]
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL3921
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
1755
P
1053_at
709.4
P
117_at
14.4
A
121_at
72.6
P
1255_g_at
4.3
A
1294_at
32.1
A
1316_at
42.3
P
1320_at
19.9
A
1405_i_at
2.2
A
1431_at
34.4
A
1438_at
82
P
1487_at
275.7
P
1494_f_at
37.2
A
1598_g_at
108
P
160020_at
63.4
A
1729_at
288
P
1773_at
87.3
P
177_at
22.9
A
179_at
58.8
A
1861_at
222.6
P
Total number of rows:
22268
Table truncated, full table size
395 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM119169.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
