|
| Status |
Public on Feb 27, 2014 |
| Title |
KD2.2 4954590048_D #CJ105-8 |
| Sample type |
RNA |
| |
|
| Source name |
MDA-MB-231_KD2
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: breast cancer cell line MDA-MB231
genotype/variation: KD2
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed by electrophoresis in agarose gel.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Sample name: KD2.2
RBP2-si2: siRNA against RBP2 #2
|
| Data processing |
The unnormalized data were normalized using lumi package in R
|
| |
|
| Submission date |
Jul 23, 2013 |
| Last update date |
Feb 27, 2014 |
| Contact name |
Qin Yan |
| E-mail(s) |
[email protected]
|
| Organization name |
Yale University
|
| Department |
Pathology
|
| Lab |
BML348
|
| Street address |
310 Cedar St
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06520-8023 |
| Country |
USA |
| |
|
| Platform ID |
GPL6947 |
| Series (1) |
| GSE49119 |
Histone demethylase RBP2 is critical for breast cancer progression and metastasis |
|
