GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM12079
Query DataSets for GSM12079
Status
Public on Nov 25, 2003
Title
C005 Renal Clear Cell Carcinoma U133A
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 64; Gender = Male; Right Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 1; Tumor Capsule Penetration = false; Tumor Perinephric Fat Invasion = false; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Scaling Target = 500; Scaling Factor = 11.09; Raw Q = 3.12; Noise = 4.65; Background = 76.41.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2004638
Submission date
Oct 22, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
[email protected]
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL96
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
1363.5
P
AFFX-BioB-M_at
4128.6
P
AFFX-BioB-3_at
1587.3
P
AFFX-BioC-5_at
3540.6
P
AFFX-BioC-3_at
2976.8
P
AFFX-BioDn-5_at
4320.9
P
AFFX-BioDn-3_at
18886.9
P
AFFX-CreX-5_at
39682.8
P
AFFX-CreX-3_at
48067.9
P
AFFX-DapX-5_at
9.9
A
AFFX-DapX-M_at
53.4
A
AFFX-DapX-3_at
30.9
A
AFFX-LysX-5_at
9.7
A
AFFX-LysX-M_at
90.6
A
AFFX-LysX-3_at
15.4
A
AFFX-PheX-5_at
15.9
A
AFFX-PheX-M_at
40.4
A
AFFX-PheX-3_at
33.6
A
AFFX-ThrX-5_at
23.6
A
AFFX-ThrX-M_at
20.4
A
Total number of rows:
22283
Table truncated, full table size
404 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM12079.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
