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Sample GSM12342 Query DataSets for GSM12342
Status Public on Oct 24, 2003
Title PGA-lv2_24h_517
Sample type RNA
 
Source name Region of the left ventricle [lv2] below the LAD artery of a sham operated mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description This dataset is a time series (1 hour [h], 4 hours, 24 hours, 48 hours, 1 week [w], and 8 weeks) intended to compare normal functioning left ventricles [lv + lv2] with infarcted [ilv] and non-infarcted left ventricles [nilv]. Ilv samples are taken from the region between the LAD artery and the apex on a mouse with myocardial infarction. Lv2 samples are from the same region in a sham operated mouse. Nilv samples are taken from the region above the infartion and the left ventricle [lv] samples mimic that region in a sham mouse. The lv and lv2 samples can be compared as both are from normal functioning hearts. For more information visit http://cardiogenomics.med.harvard.edu/groups/proj1/pages/mi_home.html
Keywords = acute myocardial infarction, AMI, cardiac
 
Submission date Oct 23, 2003
Last update date May 28, 2005
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL81
Series (1)
GSE775 Mouse model of myocardial infarction

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION_P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION_P-VALUE
AFFX-MurIL2_at 23.5 A 0.772364
AFFX-MurIL10_at 67.9 A 0.262827
AFFX-MurIL4_at 20.1 A 0.455413
AFFX-MurFAS_at 172.7 P 0.003212
AFFX-BioB-5_at 547.3 P 0.002556
AFFX-BioB-M_at 958.4 P 0.000044
AFFX-BioB-3_at 494.2 P 0.00007
AFFX-BioC-5_at 1403.5 P 0.00011
AFFX-BioC-3_at 1170.4 P 0.000044
AFFX-BioDn-5_at 1880.6 P 0.000052
AFFX-BioDn-3_at 8610.7 P 0.000081
AFFX-CreX-5_at 16841.9 P 0.000044
AFFX-CreX-3_at 20302.2 P 0.000044
AFFX-BioB-5_st 83.3 A 0.227636
AFFX-BioB-M_st 61 A 0.574038
AFFX-BioB-3_st 30.5 A 0.699394
AFFX-BioC-5_st 31.6 A 0.631562
AFFX-BioC-3_st 5.8 A 0.659339
AFFX-BioDn-5_st 183.2 A 0.083592
AFFX-BioDn-3_st 225.2 P 0.01667

Total number of rows: 12488

Table truncated, full table size 321 Kbytes.




Supplementary file Size Download File type/resource
GSM12342.CEL.gz 2.8 Mb (ftp)(http) CEL

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