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Status
Public on Aug 30, 2006
Title
Low Group, Line 2, Replicate 1, female
Sample type
RNA
Source name
female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the low group of an artificial selection experiment for aggression.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jul 28, 2006
Last update date
Aug 28, 2018
Contact name
Alexis Edwards
E-mail(s)
[email protected] Organization name
North Carolina State University
Department
Genetics
Lab
Trudy Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5404 Expression data from Drosophila subjected to artificial selection on aggression
Relations Reanalyzed by
GSE119084
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE 'P_Value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
11208.2
P
0.0005
1622892_s_at
537.4
P
0.0014
1622893_at
22111.4
P
0.0005
1622894_at
97.2
A
0.1813
1622895_at
787.2
P
0.0014
1622896_at
306.5
P
0.0005
1622897_at
17.0
A
0.5375
1622898_a_at
999.2
P
0.0005
1622899_at
44.6
P
0.0177
1622900_at
32.3
A
0.0701
1622901_at
256.5
P
0.0066
1622902_at
244.1
P
0.0078
1622903_s_at
665.7
P
0.0005
1622904_at
39.0
A
0.1227
1622905_at
57.8
M
0.0620
1622906_at
856.0
P
0.0005
1622907_at
623.4
P
0.0005
1622908_a_at
184.3
P
0.0046
1622909_at
1107.4
P
0.0005
1622910_at
4.2
A
0.6351
18769 473 Kbytes .Supplementary file Size Download File type/resource GSM123499.CEL.gz
2.1 Mb
(ftp) (http) CEL
