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Sample GSM12356 Query DataSets for GSM12356
Status Public on Oct 24, 2003
Title PGA_MI_ilv_48h_355
Sample type RNA
 
Source name Region of the heart between the LAD artery and the apex on a mouse with myocardial infarction (The infarcted area)
Organism Mus musculus
Extracted molecule total RNA
 
Description This dataset is a time series (1 hour [h], 4 hours, 24 hours, 48 hours, 1 week [w], and 8 weeks) intended to compare normal functioning left ventricles [lv + lv2] with infarcted [ilv] and non-infarcted left ventricles [nilv]. Ilv samples are taken from the region between the LAD artery and the apex on a mouse with myocardial infarction. Lv2 samples are from the same region in a sham operated mouse. Nilv samples are taken from the region above the infartion and the left ventricle [lv] samples mimic that region in a sham mouse. The lv and lv2 samples can be compared as both are from normal functioning hearts. For more information visit http://cardiogenomics.med.harvard.edu/groups/proj1/pages/mi_home.html
Keywords = acute myocardial infarction, AMI, cardiac
 
Submission date Oct 23, 2003
Last update date May 28, 2005
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL81
Series (1)
GSE775 Mouse model of myocardial infarction

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION_P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION_P-VALUE
AFFX-MurIL2_at 37.2 A 0.699394
AFFX-MurIL10_at 57.5 A 0.287743
AFFX-MurIL4_at 21.2 A 0.368438
AFFX-MurFAS_at 201.4 P 0.002275
AFFX-BioB-5_at 357.6 P 0.001102
AFFX-BioB-M_at 658.5 P 0.000044
AFFX-BioB-3_at 389 P 0.000127
AFFX-BioC-5_at 1069.6 P 0.000081
AFFX-BioC-3_at 943.9 P 0.000052
AFFX-BioDn-5_at 1406.6 P 0.000044
AFFX-BioDn-3_at 6573.7 P 0.000081
AFFX-CreX-5_at 12458.5 P 0.000044
AFFX-CreX-3_at 15276.5 P 0.000044
AFFX-BioB-5_st 28.6 A 0.205732
AFFX-BioB-M_st 72.2 A 0.48511
AFFX-BioB-3_st 32.8 A 0.699394
AFFX-BioC-5_st 10 A 0.910522
AFFX-BioC-3_st 4.6 A 0.749204
AFFX-BioDn-5_st 193.7 A 0.095667
AFFX-BioDn-3_st 145.6 P 0.039661

Total number of rows: 12488

Table truncated, full table size 321 Kbytes.




Supplementary file Size Download File type/resource
GSM12356.CEL.gz 2.9 Mb (ftp)(http) CEL

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