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GEO accession:
Sample GSM12412
Query DataSets for GSM12412
Status
Public on Nov 25, 2003
Title
C4 Renal Clear Cell Carcinoma U133B
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 65; Gender = Male; Left Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 1; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = false; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Tumor Location: upper; Scaling Target = 500; Scaling Factor = 9.85; Raw Q = 3.7; Background = 122.40.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
Submission date
Oct 23, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
[email protected]
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL97
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
1024.6
P
AFFX-BioB-M_at
2170.8
P
AFFX-BioB-3_at
1010.1
P
AFFX-BioC-5_at
2826.5
P
AFFX-BioC-3_at
1739.4
P
AFFX-BioDn-5_at
2361.5
P
AFFX-BioDn-3_at
14081.8
P
AFFX-CreX-5_at
26033.8
P
AFFX-CreX-3_at
39847
P
AFFX-DapX-5_at
128.5
A
AFFX-DapX-M_at
188.2
A
AFFX-DapX-3_at
39
A
AFFX-LysX-5_at
24.4
A
AFFX-LysX-M_at
47.7
A
AFFX-LysX-3_at
15
A
AFFX-PheX-5_at
15.2
A
AFFX-PheX-M_at
44.8
A
AFFX-PheX-3_at
81.6
A
AFFX-ThrX-5_at
41.7
A
AFFX-ThrX-M_at
198.8
A
Total number of rows:
22645
Table truncated, full table size
399 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM12412.CEL.gz
3.4 Mb
(ftp)
(http)
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