GEO help: Mouse over screen elements for information.
Status
Public on Aug 02, 2006
Title
Spinal Cord SC_REP 1
Sample type
RNA
Source name
Spinal Cord (SC)
Organism
Mus musculus Characteristics
Pooled SC from 4 male, 3 month-old C57BL/6J mice
Extracted molecule
total RNA
Label
biotin
Description
Total RNA was extracted from pooled left and right lumbar (L1-L6) SC isolated from male, 3 month-old C57BL/6J mice
Data processing
Data were obtained using the Affymetrix Microarray Suite version 5.0 (MAS 5.0) with default analysis settings and global scaling. Expression values were further normalized to the median expression for each chip and each gene across all samples.
Submission date
Aug 01, 2006
Last update date
Aug 01, 2006
Contact name
Ramin Homayouni
E-mail(s)
[email protected] Phone
901-678-1670
Organization name
University of memphis
Department
Bioinformatics
Street address
3774 Walker avenue
City
Memphis
State/province
TN
ZIP/Postal code
38152
Country
USA
Platform ID
GPL1261 Series (1)
GSE5425 Spinal cord and dorsal root ganglion gene expression
Data table header descriptions ID_REF VALUE MAS5-calculated signal intensity normalized to median expression value of each chip and each gene across all samples
ABS_CALL Per Affymetrix criteria, the call indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table ID_REF VALUE ABS_CALL 1415670_at
0.9859944
P
1415671_at
0.78556675
P
1415672_at
1.0791308
P
1415673_at
0.9000069
P
1415674_a_at
0.55923873
P
1415675_at
0.8246686
P
1415676_a_at
0.6920685
P
1415677_at
0.5957004
P
1415678_at
0.76677877
P
1415679_at
0.797885
P
1415680_at
0.9229809
P
1415681_at
0.8478651
P
1415682_at
0.8753871
P
1415683_at
0.7177344
P
1415684_at
0.7829859
P
1415685_at
0.8829801
P
1415686_at
0.7644656
P
1415687_a_at
0.9142941
P
1415688_at
0.91350937
P
1415689_s_at
1.0413857
P
45101 1039 Kbytes .Supplementary data files not provided
