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GEO accession:
Sample GSM124864
Query DataSets for GSM124864
Status
Public on Oct 16, 2006
Title
p53 family members in myogenic differentiation DeltaNp73 0 h
Sample type
RNA
Source name
C2C12 myoblast
Organism
Mus musculus
Characteristics
DeltaNp73 0 h
Extracted molecule
total RNA
Label
Biotin
Label protocol
Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
tandard Affymetrix procedures
Description
DeltaNp73 0 h after differentiation
Data processing
normalization on target 500
Submission date
Aug 03, 2006
Last update date
Jan 03, 2008
Contact name
Christof Burek
E-mail(s)
[email protected]
Phone
++49 (0)931 20147696
Organization name
Universitaet Wuerzburg
Department
Pathologie
Lab
Rosenwald
Street address
Josef-schneider-Str. 2
City
Wuerzburg
ZIP/Postal code
97080
Country
Germany
Platform ID
GPL1261
Series (2)
GSE5447
p53 family members in myogenic differentiation and rhabdomyosarcoma development
GSE8660
C-terminal diversity within the p53 family accounts for differences in DNA binding and transcriptional activity
Data table header descriptions
ID_REF
VALUE
GCOS calculated intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
432.6
P
0.000662
AFFX-BioB-M_at
551.8
P
0.000052
AFFX-BioB-3_at
346.5
P
0.00007
AFFX-BioC-5_at
1284.7
P
0.00007
AFFX-BioC-3_at
1355.4
P
0.000044
AFFX-BioDn-5_at
2374.7
P
0.000044
AFFX-BioDn-3_at
5428.4
P
0.00007
AFFX-CreX-5_at
13667.5
P
0.000044
AFFX-CreX-3_at
18246.9
P
0.000044
AFFX-DapX-5_at
270.2
P
0.000081
AFFX-DapX-M_at
560.7
P
0.000857
AFFX-DapX-3_at
748.7
P
0.000095
AFFX-LysX-5_at
33.4
P
0.028457
AFFX-LysX-M_at
61.8
A
0.123572
AFFX-LysX-3_at
143.7
P
0.002275
AFFX-PheX-5_at
64.3
P
0.046482
AFFX-PheX-M_at
71.7
P
0.012547
AFFX-PheX-3_at
121
P
0.012547
AFFX-ThrX-5_at
114.3
P
0.00762
AFFX-ThrX-M_at
131.4
P
0.00039
Total number of rows:
45101
Table truncated, full table size
1210 Kbytes
.
Supplementary data files not provided
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