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Sample GSM126420 Query DataSets for GSM126420
Status Public on Aug 11, 2006
Title LS180_Em
Sample type RNA
 
Source name LS180 cell line treated with emetine
Organism Homo sapiens
Characteristics Morphology: Epithelial
Human Caucasian colon adenocarcinoma
Biomaterial provider ATCC
Treatment protocol 100ug/mL emetine in media (treatment for 8 hours)
wash 2X with PBS
RNA extraction
Growth protocol DMEM with 10% FBS and antibiotics
Extracted molecule total RNA
Extraction protocol TRIZOL protocol
Label biotin
Label protocol As per Affymetrix Protocol
 
Hybridization protocol As per Affymetrix Protocol
Scan protocol As per Affymetrix Protocol
Description None
Data processing RAW
 
Submission date Aug 09, 2006
Last update date Aug 28, 2018
Contact name Ken Lo
E-mail(s) [email protected]
Phone 716-845-3941
Fax 716-845-3940
Organization name Roswell Park Cancer Institute
Department Cancer Genetics
Lab John Cowell
Street address Elm and Carlton Streets
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platform ID GPL570
Series (1)
GSE5486 Using GINI2 to identify novel mutations in candidate tumor suppressor genes in colon cancer cells
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE Raw Signal Intensity
ABS_CALL Detection Call
DETECTION P-VALUE Detection p-Value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
200954_at 3273.8 A 0.111572
39854_r_at 2530.3 A 0.066865
225360_at 1476.1 A 0.067627
222831_at 1282.1 A 0.140625
227617_at 1176.3 A 0.080566
214333_x_at 972.2 A 0.080566
238657_at 969.4 A 0.080566
205843_x_at 952.1 A 0.095215
226133_s_at 839.8 A 0.067627
229405_at 833.7 A 0.067627
230525_at 794.5 A 0.149658
1569105_at 773.7 A 0.149658
206419_at 714.9 A 0.095215
205382_s_at 710.6 A 0.095215
241373_at 700.9 A 0.149658
236900_x_at 694.2 A 0.080566
203558_at 687.9 A 0.080566
204189_at 686.7 A 0.067627
226768_at 680.3 A 0.095215
204611_s_at 667.6 A 0.129639

Total number of rows: 54675

Table truncated, full table size 1435 Kbytes.




Supplementary file Size Download File type/resource
GSM126420.CEL.gz 8.0 Mb (ftp)(http) CEL

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