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Sample GSM131453 Query DataSets for GSM131453
Status Public on Jan 08, 2007
Title AtGen_6-9321_Heatstress-Roots-3.0h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Roots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5628 AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.70103369140625E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.97161865234375E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 4.38597137451172E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 5.74676879882812E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.59667633056641E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.60196548461914E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 1.05960090637207E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 6.47950439453125E+001 P 1.22069998178631E-003
AFFX-r2-Ec-bioB-3_at 4.47643814086914E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 1.61947584152222E+000 A 8.50341975688934E-001
AFFX-r2-Bs-thr-5_s_at 1.22865462303162E+000 A 6.33789002895355E-001
AFFX-r2-Bs-thr-3_s_at 1.22593605518341E+000 A 6.01073980331421E-001
AFFX-r2-Bs-phe-M_at 5.36797523498535E-001 A 6.01073980331421E-001
AFFX-r2-Bs-phe-5_at 4.72535657882690E+000 A 6.33789002895355E-001
AFFX-r2-Bs-phe-3_at 9.60535824298859E-001 A 7.80517995357513E-001
AFFX-r2-Bs-lys-M_at 3.25363039970398E+000 A 3.98925989866257E-001
AFFX-r2-Bs-lys-5_at 2.62605905532837E-001 A 8.05419981479645E-001
AFFX-r2-Bs-lys-3_at 8.70432758331299E+000 A 1.94580003619194E-001
AFFX-r2-Bs-dap-M_at 6.22337043285370E-001 A 6.33789002895355E-001
AFFX-r2-Bs-dap-5_at 4.57402259111404E-001 A 8.28612983226776E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131453.CEL.gz 2.3 Mb (ftp)(http) CEL

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