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Sample GSM131455 Query DataSets for GSM131455
Status Public on Jan 08, 2007
Title AtGen_6-9811_Heatstress(3h)+1hrecovery-Shoots-4.0h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Shoots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5628 AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 3.15680297851562E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 3.16393505859375E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 5.13362060546875E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 7.56415405273438E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 2.08805999755859E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 2.04016174316406E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 1.16962875366211E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 7.19003677368164E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 8.45187072753906E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 4.18698835372925E+000 A 3.03710997104645E-001
AFFX-r2-Bs-thr-5_s_at 1.02315464019775E+001 A 1.11571997404099E-001
AFFX-r2-Bs-thr-3_s_at 1.11175155639648E+000 A 7.80517995357513E-001
AFFX-r2-Bs-phe-M_at 2.48215842247009E+000 A 3.03710997104645E-001
AFFX-r2-Bs-phe-5_at 6.28843903541565E-001 A 7.25830018520355E-001
AFFX-r2-Bs-phe-3_at 4.84295797348022E+000 A 2.46094003319740E-001
AFFX-r2-Bs-lys-M_at 1.34840238094330E+000 A 5.00000000000000E-001
AFFX-r2-Bs-lys-5_at 8.20529401302338E-001 A 3.98925989866257E-001
AFFX-r2-Bs-lys-3_at 1.97543239593506E+000 A 3.34473013877869E-001
AFFX-r2-Bs-dap-M_at 2.23804950714111E+000 A 5.00000000000000E-001
AFFX-r2-Bs-dap-5_at 1.01439392566681E+000 A 9.19434010982513E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131455.CEL.gz 2.2 Mb (ftp)(http) CEL

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