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Sample GSM131456 Query DataSets for GSM131456
Status Public on Jan 08, 2007
Title AtGen_6-9812_Heatstress(3h)+1hrecovery-Shoots-4.0h_Rep2
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Shoots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5628 AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 3.04253247070312E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 3.49676757812500E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 4.65903503417969E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 6.48506469726562E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.94723129272461E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.90607299804688E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 9.98541030883789E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 4.57159309387207E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 9.32956466674805E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 3.74387645721436E+000 A 5.67627012729645E-001
AFFX-r2-Bs-thr-5_s_at 6.05285263061523E+000 P 3.75977009534836E-002
AFFX-r2-Bs-thr-3_s_at 2.28424191474915E+000 A 7.80517995357513E-001
AFFX-r2-Bs-phe-M_at 3.62843275070190E-001 A 5.33936023712158E-001
AFFX-r2-Bs-phe-5_at 3.65600705146790E+000 A 6.33789002895355E-001
AFFX-r2-Bs-phe-3_at 8.61013698577881E+000 A 1.94580003619194E-001
AFFX-r2-Bs-lys-M_at 2.59485769271851E+000 A 3.66210997104645E-001
AFFX-r2-Bs-lys-5_at 7.54760026931763E+000 M 4.61426004767418E-002
AFFX-r2-Bs-lys-3_at 4.73050975799561E+000 A 2.19482004642487E-001
AFFX-r2-Bs-dap-M_at 1.90729349851608E-001 A 8.70360970497131E-001
AFFX-r2-Bs-dap-5_at 4.54984277486801E-001 A 9.69726979732513E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131456.CEL.gz 2.2 Mb (ftp)(http) CEL

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