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Sample GSM13157 Query DataSets for GSM13157
Status Public on Dec 04, 2003
Title Colon 1A
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
VALUE LN_C1_ADI nat. log transformed MAS5 data
VALUE LN_C1_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE VALUE LN_C1_ADI VALUE LN_C1_ADI_Norm
AFFX-MurIL2_at 23.8 3.17 3.175
AFFX-MurIL10_at 3.7 1.308 1.272
AFFX-MurIL4_at 5.4 1.686 1.728
AFFX-MurFAS_at 69.7 4.244 4.157
AFFX-BioB-5_at 185 5.22 5.179
AFFX-BioB-M_at 475.7 6.165 6.157
AFFX-BioB-3_at 359.7 5.885 5.861
AFFX-BioC-5_at 718.2 6.577 6.605
AFFX-BioC-3_at 674.9 6.515 6.53
AFFX-BioDn-5_at 743.7 6.612 6.636
AFFX-BioDn-3_at 3612.3 8.192 8.286
AFFX-CreX-5_at 6945.7 8.846 8.924
AFFX-CreX-3_at 11846.7 9.38 9.415
AFFX-BioB-5_st 56.4 4.032 3.947
AFFX-BioB-M_st 56.3 4.031 3.943
AFFX-BioB-3_st 20.6 3.025 2.947
AFFX-BioC-5_st 10.8 2.38 2.329
AFFX-BioC-3_st 20.4 3.016 2.945
AFFX-BioDn-5_st 53.2 3.974 3.887
AFFX-BioDn-3_st 94.9 4.553 4.472

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.




Supplementary data files not provided

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