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Sample GSM13158 Query DataSets for GSM13158
Status Public on Dec 04, 2003
Title Colon 2A
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
VALUE LN_C2_ADI nat. log transformed MAS5 data
VALUE LN_C2_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE VALUE LN_C2_ADI VALUE LN_C2_ADI_Norm
AFFX-MurIL2_at 10.1 2.313 2.215
AFFX-MurIL10_at 19.5 2.97 2.872
AFFX-MurIL4_at 15.4 2.734 2.634
AFFX-MurFAS_at 64.1 4.16 4.064
AFFX-BioB-5_at 346.9 5.849 5.813
AFFX-BioB-M_at 817.6 6.706 6.704
AFFX-BioB-3_at 580.4 6.364 6.345
AFFX-BioC-5_at 1264.6 7.143 7.171
AFFX-BioC-3_at 1017.6 6.925 6.944
AFFX-BioDn-5_at 1161.5 7.057 7.083
AFFX-BioDn-3_at 5484.1 8.61 8.63
AFFX-CreX-5_at 12441.2 9.429 9.335
AFFX-CreX-3_at 20486.8 9.928 9.681
AFFX-BioB-5_st 47.8 3.867 3.778
AFFX-BioB-M_st 65.1 4.176 4.08
AFFX-BioB-3_st 20.3 3.011 2.909
AFFX-BioC-5_st 16.4 2.797 2.697
AFFX-BioC-3_st 38.9 3.661 3.56
AFFX-BioDn-5_st 49.8 3.908 3.811
AFFX-BioDn-3_st 137.7 4.925 4.843

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.




Supplementary data files not provided

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