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Sample GSM13159 Query DataSets for GSM13159
Status Public on Dec 04, 2003
Title Colon 3A
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
VALUE LN_C3_ADI nat. log transformed MAS5 data
VALUE LN_C3_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE VALUE LN_C3_ADI VALUE LN_C3_ADI_Norm
AFFX-MurIL2_at 8.3 2.116 2.07
AFFX-MurIL10_at 13.5 2.603 2.534
AFFX-MurIL4_at 20 2.996 2.965
AFFX-MurFAS_at 76 4.331 4.227
AFFX-BioB-5_at 225 5.416 5.366
AFFX-BioB-M_at 382.6 5.947 5.939
AFFX-BioB-3_at 297.9 5.697 5.668
AFFX-BioC-5_at 704.1 6.557 6.596
AFFX-BioC-3_at 569.6 6.345 6.368
AFFX-BioDn-5_at 647.8 6.474 6.507
AFFX-BioDn-3_at 3230 8.08 8.208
AFFX-CreX-5_at 7155.1 8.876 8.977
AFFX-CreX-3_at 10994.7 9.305 9.336
AFFX-BioB-5_st 92.1 4.523 4.422
AFFX-BioB-M_st 70.9 4.261 4.157
AFFX-BioB-3_st 20.8 3.035 2.938
AFFX-BioC-5_st 8.8 2.175 2.097
AFFX-BioC-3_st 27 3.296 3.204
AFFX-BioDn-5_st 81.8 4.404 4.3
AFFX-BioDn-3_st 108.8 4.69 4.594

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.




Supplementary data files not provided

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