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Sample GSM13166 Query DataSets for GSM13166
Status Public on Dec 04, 2003
Title Jejunum 1A
Sample type RNA
 
Source name Whole segment, jejunum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL81
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_J1_ADI nat. log transformed MAS5 data
LN_J1_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_J1_ADI LN_J1_ADI_Norm
AFFX-MurIL2_at 14.2 2.653 2.594
AFFX-MurIL10_at 15.4 2.734 2.71
AFFX-MurIL4_at 4.4 1.482 1.397
AFFX-MurFAS_at 62.6 4.137 4.174
AFFX-BioB-5_at 387.4 5.959 5.949
AFFX-BioB-M_at 627.4 6.442 6.389
AFFX-BioB-3_at 503.1 6.221 6.189
AFFX-BioC-5_at 1038.2 6.945 6.845
AFFX-BioC-3_at 941.5 6.847 6.764
AFFX-BioDn-5_at 979.3 6.887 6.793
AFFX-BioDn-3_at 4596.8 8.433 8.259
AFFX-CreX-5_at 10523.7 9.261 9.139
AFFX-CreX-3_at 16595.3 9.717 9.694
AFFX-BioB-5_st 115.7 4.751 4.788
AFFX-BioB-M_st 75.5 4.324 4.361
AFFX-BioB-3_st 35.9 3.581 3.602
AFFX-BioC-5_st 27.4 3.311 3.301
AFFX-BioC-3_st 66.5 4.197 4.209
AFFX-BioDn-5_st 77.6 4.352 4.388
AFFX-BioDn-3_st 130.9 4.874 4.908

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.




Supplementary data files not provided

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