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Sample GSM1319640 Query DataSets for GSM1319640
Status Public on Jan 31, 2015
Title 131I_thyroid_A
Sample type RNA
 
Source name Mouse thyroid, 0.85 Gy, 24h
Organism Mus musculus
Characteristics strain: Balb/c
tissue: thyroid
absorbed dose: 0.85 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Jan 31, 2014
Last update date Jan 31, 2015
Contact name Nils Rudqvist
E-mail(s) [email protected]
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE54594 Dose-specific transcriptional responses in thyroid tissue in mice after 131I administration

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2659724 85.8125 0.98600507
ILMN_2706226 91.625 0.83587784
ILMN_1217123 97.3125 0.4860051
ILMN_2780205 2675.375 0
ILMN_2713160 85 0.99236643
ILMN_2650094 92.625 0.7748092
ILMN_2703479 92.6875 0.7748092
ILMN_2952493 101.4375 0.36132315
ILMN_2731592 106.9375 0.1475827
ILMN_2729743 291.5 0
ILMN_1252621 284.5 0
ILMN_3162407 1285.375 0
ILMN_2692952 108.5 0.12722646
ILMN_2910076 104.9375 0.20992367
ILMN_2709047 150 0
ILMN_2718462 159.1875 0
ILMN_2882078 319.0625 0
ILMN_2882079 147.6875 0
ILMN_2771368 103.125 0.25063613
ILMN_2724039 94.75 0.6755725

Total number of rows: 25697

Table truncated, full table size 707 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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