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Sample GSM1319643

Query DataSets for GSM1319643

Status

Public on Jan 31, 2015

Title

131I_thyroid_D

Sample type

RNA

Source name

Mouse thyroid, 0 Gy, 24h

Organism

Mus musculus

Characteristics

strain: Balb/c
tissue: thyroid
absorbed dose: 0 Gy

Extracted molecule

total RNA

Extraction protocol

Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.

Label

biotin

Label protocol

Standard Illumina labeling protocol

Hybridization protocol

Standard Illumina hybridization protocol

Scan protocol

Standard Illumina scanning protocol

Data processing

The data were normalized using quantile normalization with BASE

Submission date

Jan 31, 2014

Last update date

Jan 31, 2015

Contact name

Nils Rudqvist

E-mail(s)

[email protected]

Organization name

Gothenburg university

Street address

Gula stråket 2b

City

Göteborg

State/province

ZIP/Postal code

41345

Country

Sweden

Platform ID

GPL6885

Series (1)

GSE54594

Dose-specific transcriptional responses in thyroid tissue in mice after 131I administration

Data table header descriptions
ID_REF
VALUE	quantile normalized
Detection Pval

Data table
ID_REF	VALUE	Detection Pval
ILMN_2659724	109.625	0.08805031
ILMN_2706226	93.5625	0.75220126
ILMN_1217123	114.625	0.044025157
ILMN_2780205	4798.125	0
ILMN_2713160	98.4375	0.4528302
ILMN_2650094	85.9375	0.9811321
ILMN_2703479	96.0625	0.60880506
ILMN_2952493	89.625	0.918239
ILMN_2731592	133.1875	0
ILMN_2729743	361.1875	0
ILMN_1252621	230.0625	0
ILMN_3162407	976.375	0
ILMN_2692952	103.375	0.26666668
ILMN_2910076	97.6875	0.5308176
ILMN_2709047	199.375	0
ILMN_2718462	167.75	0
ILMN_2882078	300.9375	0
ILMN_2882079	149.0625	0
ILMN_2771368	103.9375	0.2163522
ILMN_2724039	98.8125	0.4528302

Total number of rows: 25697

Table truncated, full table size 707 Kbytes.

Supplementary data files not provided

Processed data included within Sample table

Processed data are available on Series record