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Sample GSM133532 Query DataSets for GSM133532
Status Public on Sep 02, 2006
Title SUP fraction used to normalize Scc1-HA6 ChIP (6th)
Sample type genomic
 
Source name Sup fraction (equal to Whole Cell Extract)
Organism Saccharomyces cerevisiae
Characteristics strain genotype: Scc1-HA6 ctf18delta
Extracted molecule genomic DNA
Label biotin-11-ddATP
 
Hybridization protocol Hybridization, blocking and washing were carried out as previously described (Katou et al., 2003, Nature) (Lengronne et al., 2004, Nature). Samples were hybridized for 16 hours at 42ÂșC in a hybridization oven (GeneChip Hybridization Oven 640, Affymetrix).
Scan protocol Washing and scanning protocol provided by Affymetrix was performed automatically on a fluidics station (GeneChip fluidics station 450, Affymetrix).
Description Sup fraction used to normalize the IP GSM133517
Data processing Data were processed following the protocol provided by Affymetrix (GCOS ver 1.4)
 
Submission date Sep 01, 2006
Last update date Sep 01, 2006
Contact name Armelle Lengronne
E-mail(s) [email protected]
Phone +33 499 61 9955
Organization name CNRS
Department Institut de Genetique Humaine
Lab Equipe Pasero
Street address 141 rue de la Cardonille
City Montpellier
ZIP/Postal code 34396
Country France
 
Platform ID GPL347
Series (1)
GSE5719 Cohesin and cohesion establishment factors distribution on S.Cerevisiae chromosome VI during the cell cycle

Data table header descriptions
ID_REF
VALUE Raw signal Intensity
Detection p-value

Data table
ID_REF VALUE Detection p-value
c6-1_s_at 20803.4 0.000491
c6-3_s_at 25124.4 0.000219
c6-5_at 6142.5 0.125
c6-7_s_at 22788.7 0.000219
c6-9_s_at 23062.5 0.000219
c6-11_s_at 27421.2 0.000327
c6-13_s_at 13030.7 0.000219
c6-15_at 7184.1 0.0625
c6-17_at 7138.6 0.000219
c6-18_at 1084.1 0.006532
c6-19_s_at 12028.3 0.000219
c6-20_at 4393.7 0.000219
c6-21_at 7046.7 0.000219
c6-23_at 3121.2 0.000266
c6-25_s_at 17048.4 0.000219
c6-26_at 1314.9 0.09375
c6-28_at 1982.9 0.002257
c6-30_s_at 7028.8 0.000219
c6-32_s_at 5809.4 0.000266
c6-34_s_at 15237.3 0.000219

Total number of rows: 882

Table truncated, full table size 22 Kbytes.




Supplementary data files not provided

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