|
| Status |
Public on Aug 06, 2007 |
| Title |
Primary human neuroblastoma cS033 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
cS033
|
| Organism |
Homo sapiens |
| Characteristics |
Primary human neuroblastoma
|
| Extracted molecule |
genomic DNA |
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
normal human reference genomic DNA
|
| Organism |
Homo sapiens |
| Characteristics |
normal human reference genomic DNA
|
| Extracted molecule |
genomic DNA |
| Label |
Cy5
|
| |
|
| |
| Description |
The 500-ng aliquots of tumors and reference DNAs were labeled by random priming with each Cy3-dCTP and Cy5-dCTP (Amersham Pharmacia, Piscataway, NJ). Hybridization was performed as previously reported [Pinkel D. et al. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet 1998;20:207-11.].
|
| Data processing |
UCSF Spot and UCSF Sproc programs to analyze values for spotted clones [Jain A.N. et al. Fully automatic quantification of microarray image data. Genome Res 2002;12:325-32.] were used.
|
| |
|
| Submission date |
Sep 06, 2006 |
| Last update date |
Aug 06, 2007 |
| Contact name |
Akira Nakagawara |
| Organization name |
Chiba Cancer Center Research Institute
|
| Street address |
666-2 Nitona, Chuoh-ku
|
| City |
Chiba |
| ZIP/Postal code |
260-8717 |
| Country |
Japan |
| |
|
| Platform ID |
GPL4242 |
| Series (1) |
| GSE5784 |
Array-based comparative genomic hybridization analysis of primary neuroblastoma |
|
