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Sample GSM134912 Query DataSets for GSM134912
Status Public on Jan 03, 2007
Title A549 Low dose treatment group (100 nM).
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics See publication for details.
Treatment protocol A549 Low dose treatment group (100 nM). 5-aza-2'-deoxycytidine qod for 6 days.
Growth protocol See publication for details.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix
 
Hybridization protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Scan protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Description A549 Low dose treatment group (100 nM).
Data processing Raw signal data without normalization
 
Submission date Sep 06, 2006
Last update date Aug 28, 2018
Contact name David S Shames
E-mail(s) [email protected]
Phone 650-225-7559
Organization name Genentech Inc
Department Oncology Biomarker Development
Lab Shames
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE5816 A Genome-wide Screen for Hypermethylated Genes in Lung Cancer
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE A549-AzaL Signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 298.4
AFFX-BioB-M_at 431.2
AFFX-BioB-3_at 277.2
AFFX-BioC-5_at 882.1
AFFX-BioC-3_at 1009.2
AFFX-BioDn-5_at 1679.4
AFFX-BioDn-3_at 5258.4
AFFX-CreX-5_at 10902.9
AFFX-CreX-3_at 14385.4
AFFX-DapX-5_at 8.3
AFFX-DapX-M_at 2.6
AFFX-DapX-3_at 3.2
AFFX-LysX-5_at 3.1
AFFX-LysX-M_at 6.4
AFFX-LysX-3_at 3.2
AFFX-PheX-5_at 1.7
AFFX-PheX-M_at 2
AFFX-PheX-3_at 15.9
AFFX-ThrX-5_at 5
AFFX-ThrX-M_at 4.7

Total number of rows: 54675

Table truncated, full table size 846 Kbytes.




Supplementary file Size Download File type/resource
GSM134912.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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