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Sample GSM134938 Query DataSets for GSM134938
Status Public on Nov 12, 2006
Title A549 Control treatment group (DMSO).
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics See publication for details.
Treatment protocol A549 Control treatment group. DMSO qod for 6 days.
Growth protocol See publication for details.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix
 
Hybridization protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Scan protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Description A549 Control treatment group (DMSO).
Data processing Raw signal data without normalization
 
Submission date Sep 06, 2006
Last update date Aug 28, 2018
Contact name David S Shames
E-mail(s) [email protected]
Phone 650-225-7559
Organization name Genentech Inc
Department Oncology Biomarker Development
Lab Shames
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE5816 A Genome-wide Screen for Hypermethylated Genes in Lung Cancer
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE A549-DMSO Signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 301.2
AFFX-BioB-M_at 351.3
AFFX-BioB-3_at 194.3
AFFX-BioC-5_at 802.6
AFFX-BioC-3_at 898
AFFX-BioDn-5_at 1508.7
AFFX-BioDn-3_at 4720.1
AFFX-CreX-5_at 9694
AFFX-CreX-3_at 13072.2
AFFX-DapX-5_at 18.6
AFFX-DapX-M_at 12.1
AFFX-DapX-3_at 15.3
AFFX-LysX-5_at 12.5
AFFX-LysX-M_at 4.2
AFFX-LysX-3_at 1.8
AFFX-PheX-5_at 1.6
AFFX-PheX-M_at 0.9
AFFX-PheX-3_at 5.7
AFFX-ThrX-5_at 21.1
AFFX-ThrX-M_at 4.8

Total number of rows: 54675

Table truncated, full table size 845 Kbytes.




Supplementary file Size Download File type/resource
GSM134938.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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