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GEO accession:
Sample GSM136333
Query DataSets for GSM136333
Status
Public on Sep 30, 2007
Title
LCM stroma sample from patient #45
Sample type
RNA
Source name
human breast cancer stroma
Organism
Homo sapiens
Characteristics
diagnosis: IBC
status: Deceased
Extracted molecule
total RNA
Extraction protocol
PicoPure kit (Arcturus)
Label
biotin
Label protocol
Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol
Standard Affy protocol
Scan protocol
Standard Affy protocol
Description
Chemo: No, ER: POS, Her2Neu: POS, Stage: IIIA, Clinical IBC: No
Data processing
RMA
Submission date
Sep 15, 2006
Last update date
Feb 17, 2016
Contact name
Stefan Ambs
Organization name
NCI
Lab
LHC
Street address
37 Convent Dr Bldg 37 Room 3050
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platform ID
GPL96
Series (1)
GSE5847
Tumor and stroma from breast by LCM
Data table header descriptions
ID_REF
Affy ID
VALUE
RMA log 2 expression levels
Data table
ID_REF
VALUE
1007_s_at
9.561787137
1053_at
4.834022893
117_at
6.206549159
121_at
7.927066369
1255_g_at
3.958660291
1294_at
8.168978835
1316_at
7.136606926
1320_at
4.743186575
1405_i_at
8.351782412
1431_at
3.652631632
1438_at
6.599760285
1487_at
7.204219018
1494_f_at
6.528697253
1598_g_at
9.817928812
160020_at
7.241225436
1729_at
8.729646616
1773_at
5.030536506
177_at
5.01361167
179_at
8.592241683
1861_at
5.193515827
Total number of rows:
22283
Table truncated, full table size
496 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM136333.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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