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| Status |
Public on Jan 01, 2007 |
| Title |
Bthetaiotaomicron_NMRIcecum_Stdchow_10d_#8431 |
| Sample type |
RNA |
| |
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| Source name |
Bacteroides thetaiotaomicron, monoassociation, cecum NMRI mice, 10days
|
| Organism |
Bacteroides thetaiotaomicron |
| Characteristics |
Bacteroides thetaiotaomicron, monoassociation, cecum NMRI mice, 10days
|
| Extracted molecule |
total RNA |
| Label |
biotin
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| |
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| Description |
Bacteroides thetaiotaomicron monoassociated in gnotobiotic NMRI mice on a standard polysaccharide-rich diet, harvested from the cecum after 10 days.
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| Data processing |
MAS5; scaling = 500
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| Submission date |
Sep 18, 2006 |
| Last update date |
Sep 19, 2006 |
| Contact name |
Justin L. Sonnenburg |
| E-mail(s) |
[email protected]
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| Phone |
314-362-5443
|
| URL |
http://gordonlab.wustl.edu/metaview/bt
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| Organization name |
Washington University
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| Department |
Center for Genome Sciences
|
| Lab |
Jeffrey I. Gordon
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| Street address |
4444 Forest Park
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| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63108 |
| Country |
USA |
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| Platform ID |
GPL1821 |
| Series (2) |
| GSE5865 |
B.thetaiotaomicron or B. longum mono-association versus B. thetaiotaomicron/B. longum co-colonization, PR chow, NMRI |
| GSE5869 |
B. thetaiotaomicron or B. longum mono-association vs. bi-association |
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| Data table header descriptions |
| ID_REF |
|
| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| SusA_at |
1671 |
P |
.000936 |
| SusB_at |
4889.8 |
P |
.000737 |
| SusC_at |
11015.4 |
P |
.000737 |
| SusD_at |
5463.8 |
P |
.000737 |
| SusE_at |
2361.5 |
P |
.001488 |
| SusF_at |
5268.3 |
P |
.000737 |
| SusG_at |
2005.6 |
P |
.04343 |
| SusR_at |
1518.8 |
P |
.001183 |
| BT0001_at |
463.5 |
P |
.007953 |
| BT0002_at |
72.6 |
A |
.675178 |
| BT0003_at |
59.2 |
A |
.675178 |
| BT0004_at |
50.4 |
A |
.827276 |
| BT0005_at |
394.2 |
A |
.139354 |
| BT0006_at |
96 |
A |
.513937 |
| BT0007_at |
93.2 |
A |
.253373 |
| BT0008_at |
2301.2 |
P |
.001488 |
| BT0009_at |
112.1 |
A |
.649648 |
| BT0010_at |
405.2 |
A |
.596617 |
| BT0011_at |
53.3 |
A |
.623424 |
| BT0012_at |
508.4 |
A |
.155448 |
Total number of rows: 6601
Table truncated, full table size 174 Kbytes.
| Supplementary data files not provided |
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